Repbase Reports
2014, Volume 14, Issue 6
June 30, 2014
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 1811

Nimb-4_DR

Non-LTR retrotransposon from zebrafish - consensus.

Submitted:
27-Nov-2013 		Accepted:
06-MAY-2014
Key Words:
Nimb; Non-LTR Retrotransposon; Transposable Element; Nimb-4_DR
Source:
Danio rerio 		Organism:
Danio rerio 		Taxonomy:
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
[] Authors:
Jurka,J.
Title:
Non-LTR retrotransposons from zebrafish.
Journal:
Repbase Reports 14(6), 1811-1811 (2014)
Abstract:
>96% identical to consensus. Low-copy number. A composite repeat including L1, Nimb and tRNA genes. The region 2210-6000 is similar to L1 and the region 6182-9144 is similar to Nimb. The sequence between them is like Gypsy LTR. The 5' region upstream of L1 is likely a part of tRNA gene array.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Howe,K., Clark,M.D., Torroja,C.F., Torrance,J., Berthelot,C., Muffato,M., Collins,J.E., Humphray,S., McLaren,K. et al.
    The zebrafish reference genome sequence and its relationship to the human genome.
    Nature 496(7446), 498-503 (2013)

© 2001-2024 - Genetic Information Research Institute