Repbase Reports
2016, Volume 16, Issue 5
May 31, 2016
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 1008

Gypsy-15_Sit-I

LTR retrotransposon from the foxtail millet genome: internal portion.

Submitted:
29-May-2012 		Accepted:
31-May-2016
Key Words:
Gypsy; LTR Retrotransposon; Transposable Element; Gypsy-15_Sit_; Gypsy-15_Sit-LTR; Gypsy-15_Sit-I
Source:
Setaria italica 		Organism:
Setaria italica 		Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
[] Authors:
Jurka,J.
Title:
LTR retrotransposons from the foxtail millet genome.
Journal:
Repbase Reports 16(5), 1008-1008 (2016)
Abstract:
Positions [3331-3786] - Reverse transcriptase Positions [4864-5361] - Integrase core LTRs are 99% similar to each other.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Zhang,G., Liu,X., Quan,Z., Cheng,S., Xu,X., Pan,S., Xie,M., Zeng,P., Yue,Z., Wang,W., Tao,Y., Bian,C. et al.
    Genome sequence of foxtail millet (Setaria italica) provides insights into grass evolution and biofuel potential.
    Nat Biotechnol 30(6), 549-554 (2012)

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