Repbase Reports
2017, Volume 17, Issue 4
April 30, 2017
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 444

Ginger1-3_OT

DNA transposon, consensus.

Submitted:
29-Sep-2014 		Accepted:
29-SEP-2014
Key Words:
Ginger1; DNA transposon; Transposable Element; Ginger1-3_OT
Source:
Oxytricha trifallax 		Organism:
Oxytricha trifallax 		Taxonomy:
Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha
[] Authors:
Bao,W.
Title:
DNA transposons from the Oxytricha trifallax micronuclear genome.
Journal:
Repbase Reports 17(4), 444-444 (2017)
Abstract:
>96% identical to the consensus. TSDs are 6-bp long. TIRs are 241-bp long. Contains degenerated coding sequences for Tpase similar to Ginger1-2_HM_1p. Insertion of other repeats is removed.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Chen,X., Bracht,J.R., Goldman,A.D., Dolzhenko,E., Clay,D.M., Swart,E.C., Perlman,D.H., Doak,T.G., Stuart,A. et al.
    The Architecture of a Scrambled Genome Reveals Massive Levels of Genomic Rearrangement during Development.
    Cell 158(5), 1187-1198 (2014)

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