Repbase Reports
2019, Volume 19, Issue 11
November 30, 2019
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 2339

LTR-1_LVa-LTR

LTR retrotransposon, long terminal portion - consensus.

Submitted:
29-Oct-2019 		Accepted:
30-Nov-2019
Key Words:
LTR Retrotransposon; Transposable Element; Nonautonomous; LTR-1_LVa-LTR
Source:
Litopenaeus vannamei 		Organism:
Litopenaeus vannamei 		Taxonomy:
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Litopenaeus
[] Authors:
Bao,W.
Title:
LTR retrotransposons from the shrimp genome.
Journal:
Repbase Reports 19(11), 2339-2339 (2019)
Abstract:
~91% identical to the consensus. Orientation is indeterminate. TSDs are 4-bp long. The Shrimp Epigenome (shrimpENCODE) Project is funded by the FUCOBI Foundation of Ecuador, Environmental Genomics Inc., MA, USA, and USDA-NRSP-8.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Alcivar-Warren,A., Bogden,R., Tao,Q., Iyer,S., Mikhaylenko,G., Wittendorp,J., Mraz,A., Hart,E. and Hatas,E.
    et al
    The shrimp epigenome (shrimpENCODE) project: efforts to sequence the genome of specific pathogen-free (SPF) Litopenaeus vannamei from the United States.
    unpublished

© 2001-2024 - Genetic Information Research Institute