Repbase Reports |
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| 2021, Volume 21, Issue 11 |
| November 30, 2021 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 6573 |
hAT-1a_Csi |
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hAT-1a_Csi, a DNA transposon from the tea genome. |
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Submitted: 26-Oct-2021 |
Accepted: 30-Nov-2021 |
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Key Words: hAT; DNA transposon; Transposable Element; autonomous; hAT-1a_Csi |
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Source: Camellia sinensis |
Organism: Camellia sinensis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: Transposons from the tea genome (Camellia sinensis). |
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Journal: Repbase Reports 21(11), 6573-6573 (2021) |
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Abstract: Analyzed genome of tea: GCA_013676235.1. Consensus of 4 entire length seqs (TIR to TIR); mean 93.8% identity to consensus. Additional features: 11 nt TIRs; 8 nt TSDs; the copy at CM025503 is autonomous; two major subpopulations of hAT-1_Csi occur (a and b), which consensus share 87.5% similarity; TIR and subterminal regions are 90% similar to those of hAT-2_Csi.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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