Repbase Reports |
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| 2021, Volume 21, Issue 12 |
| December 31, 2021 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 6795 |
Guadalupe-N16 |
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Guadalupe-N16 member of the family. |
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Submitted: 08-Dec-2021 |
Accepted: 31-Dec-2021 |
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Key Words: MuDR; DNA transposon; Transposable Element; Nonautonomous; Guadalupe-N16 |
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Source: Capsicum annuum |
Organism: Capsicum annuum |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: Guadalupe, a family of MuDR transposons from the Capsicum annuum genome. |
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Journal: Repbase Reports 21(12), 6795-6795 (2021) |
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Abstract: Analyzed genome of chili pepper: GCF_000710875.1 v1.0. Consensus of 14 seqs with similar lengths, 12 with both termini and 2 truncated a few bases near 5 prime end; mean 94.5% identity to consensus. Additional features: twenty major subpopulations of Guadalupe occur in this chili pepper; 9 nt TSDs, >90% AT-rich; 51 nt TIRs, mean similarity of 70%.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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