Repbase Reports
2021, Volume 21, Issue 6
June 30, 2021
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 3016

Gypsy-64_ALy-I

LTR retrotransposon from the Arabidopsis lyrata genome: internal portion, consensus.

Submitted:
20-Aug-2020 		Accepted:
30-Jun-2021
Key Words:
Gypsy; LTR Retrotransposon; Transposable Element; Gypsy-64_ALy-I; Gypsy-64_ALy-LTR
Source:
Arabidopsis lyrata subsp. lyrata 		Organism:
Arabidopsis lyrata subsp. lyrata 		Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata
[] Authors:
Bao,W.
Title:
LTR retrotransposons from the Arabidopsis lyrata genome.
Journal:
Repbase Reports 21(6), 3016-3016 (2021)
Abstract:
~97% identical to the consensus. The Gag-Pol-encoding portion is ~92% identical to that of Gypsy-31_ALY-I, though their LTRs are only ~78% identical.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Hu,T.T., Pattyn,P., Bakker,E.G., Cao,J., Cheng,J.F., Clark,R.M., Fahlgren,N., Fawcett,J.A. and Grimwood,J.
    et al
    The Arabidopsis lyrata genome sequence and the basis of rapid genome size change.
    Nat Genet 43(5), 476-481 (2011)

© 2001-2024 - Genetic Information Research Institute