Repbase Reports
2021, Volume 21, Issue 9
September 30, 2021
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 5241

L1-5C_ALy

L1 non-LTR retrotransposon from Arabidopsis lyrata - a consensus.

Submitted:
08-Oct-2020 		Accepted:
30-Sep-2021
Key Words:
L1; Non-LTR Retrotransposon; Transposable Element; L1-5C_ALy
Source:
Arabidopsis lyrata 		Organism:
Arabidopsis lyrata 		Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
[] Authors:
Bao,W.
Title:
Non-LTR retrotransposons from the Arabidopsis lyrata genome.
Journal:
Repbase Reports 21(9), 5241-5241 (2021)
Abstract:
~99% identical to consensus. 2 copies. The unusual long length of L1-5C_ALy, and the common 3'-part ecoding ORF2p, probablly reflects this family is a recombinant from two different families, one involves L1-5C2_ALy.
Derived:
[2] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:
  1. Hu,T.T., Pattyn,P., Bakker,E.G., Cao,J., Cheng,J.F., Clark,R.M., Fahlgren,N., Fawcett,J.A. and Grimwood,J.
    et al
    The Arabidopsis lyrata genome sequence and the basis of rapid genome size change.
    Nat Genet 43(5), 476-481 (2011)

© 2001-2024 - Genetic Information Research Institute