Repbase Reports

2022, Volume 22, Issue 11
November 30, 2022
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 7308

SINE2-6_Cba

SINE2-6_Cba, a novel SINE retroposon from the Capsicum baccatum genome.

Submitted:
08-Nov-2022
Accepted:
30-Nov-2022
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-6_Cba
Source:
Capsicum baccatum
Organism:
Capsicum baccatum
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
SINE retroposons from the Capsicum baccatum genome.
Journal:
Repbase Reports 22(11), 7308-7308 (2022)
Abstract:
De novo TE library from GCA_002271885.2. Consensus of 50 seqs; mean 95.02% identity to consensus. Additional features: tRNA related region (1-90); A box (14-24); B box (66-76); tRNA-unrelated region (91-224); poly A tail (225-236); 94.22% similar to SolS-VI of Repbase.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute