Repbase Reports |
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| 2022, Volume 22, Issue 6 |
| June 30, 2022 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3923 |
B1FID-1_DaPu |
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SINE from the Central American agouti genome, consensus. |
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Submitted: 02-Mar-2020 |
Accepted: 30-Jun-2022 |
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Key Words: SINE1/7SL; SINE; Non-LTR Retrotransposon; Transposable Element; Nonautonomous; B1FID-1_DaPu |
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Source: Dasyprocta punctata |
Organism: Dasyprocta punctata |
Taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Dasyproctidae; Dasyprocta |
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Authors: Kojima,K.K. |
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Title: SINEs from the Central American agouti genome. |
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Journal: Repbase Reports 22(6), 3923-3923 (2022) |
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Abstract: ~99% identical to consensus. The 5' region (1-146) is ~86% identical to those of B1F-type SINEs (B1F-1_CLan, B1F1, B1F1A, B1_Mur1 etc.) and the 3' region (147-229) is ~87% identical to the 5' regions of CAVID2D. It is often inserted in a family of B1F with TSDs of ACCAGCCTGGGC.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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