Repbase Reports |
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| 2022, Volume 22, Issue 6 |
| June 30, 2022 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3366 |
Cassandra-1_SHS-LTR |
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LTR retrotransposon from the sugarcane genome - long terminal repeat consensus. |
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Submitted: 18-Sep-2018 |
Accepted: 30-Jun-2022 |
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Key Words: LTR Retrotransposon; Transposable Element; Nonautonomous; Cassandra-1_SHS; Cassandra; Cassandra-1_SHS-LTR |
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Source: Saccharum hybrid cultivar |
Organism: Saccharum hybrid cultivar |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Saccharinae; Saccharum; Saccharum officinarum complex |
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Authors: Kojima,K.K. |
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Title: Cassandra-type non-autonomous LTR retrotransposon families from the plant genomes. |
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Journal: Repbase Reports 22(6), 3366-3366 (2022) |
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Abstract: ~94% identical to consensus. 4 to 5-bp TSDs. It is a family of Cassandra, non-autonomous LTR retrotransposons having 5S rRNA-derived sequences.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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