Repbase Reports |
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| 2023, Volume 23, Issue 1 |
| January 31, 2023 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 621 |
SINE2-3_Sly |
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SINE2-3_Sly, a novel SINE retroposon from the Solanum lycopersicum genome. |
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Submitted: 27-Dec-2022 |
Accepted: 31-Jan-2023 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-3_Sly |
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Source: Solanum lycopersicum |
Organism: Solanum lycopersicum |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SolS-X, a novel SINE retroposon family from Solanaceae. |
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Journal: Repbase Reports 23(1), 621-621 (2023) |
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Abstract: Analyzed genome: GCF_000188115.4. Consensus of 80 seqs; mean 80.48% identity to consensus. Additional features: tRNA related region (1-82); A box (14-24); B box (58-68); tRNA-unrelated region (83-117); poly A tail (118-126); SolS-X consenus sequences in seven genera of Solanaceae, including SINE2-9_Cba, share 89.00% similarity.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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