Repbase Reports

2023, Volume 23, Issue 2
February 28, 2023
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 917

LINE1-3_Mes

LINE1-3_Mes, a novel non-LTR retrotransposon from the Manihot esculenta genome.

Submitted:
01-Feb-2023
Accepted:
28-Feb-2023
Key Words:
L1; Non-LTR Retrotransposon; Transposable Element; autonomous; LINE1-3_Mes
Source:
Manihot esculenta
Organism:
Manihot esculenta
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Manihoteae; Manihot
[] Authors:
Aguilera,P.M. and Grabiele,M.
Title:
LINE retrotransposons from the mandioca genome.
Journal:
Repbase Reports 23(2), 917-917 (2023)
Abstract:
De novo TE library from GCF_001659605.2. Consensus of 25 seqs; mean 85.19% identity to consensus; some copies with visibles TSDs. Additional features: ORF1 (88-1173); ORF2 (1170-5219); poly A tail (5239-5249); 65 genomic copies >1000 nt, 39 in genes, 34 in CDS.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute