Repbase Reports

2023, Volume 23, Issue 3
March 31, 2023
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 1354

hAT-N3a_Ipa

hAT-N3a_Ipa, a novel transposon from the Ilex paraguariensis genome.

Submitted:
01-Mar-2023
Accepted:
31-Mar-2023
Key Words:
hAT; DNA transposon; Transposable Element; Nonautonomous; hAT-N3a_Ipa
Source:
Ilex paraguariensis
Organism:
Ilex paraguariensis
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex
[] Authors:
Aguilera,P.M. and Grabiele,M.
Title:
DNA transposons from the yerba mate genome.
Journal:
Repbase Reports 23(3), 1354-1354 (2023)
Abstract:
De novo search via RepeatModeler from GCA_905181385.1. Consensus of 25 seqs; mean 86.61% identity to consensus. Additional features: 13 nt TIRs 84.60% identity; 8 nt TSDs. hAT-N3a and hAT-N3b mainly differentiate by indels.
Derived:
[1] (Consensus)
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute