Repbase Reports |
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2023, Volume 23, Issue 4 |
April 30, 2023 |
Copyright © 2001-2024 - Genetic Information Research Institute, California |
ISSN# 1534-830X |
Page 2224 |
Mariner-26_OT |
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DNA transposon, consensus. |
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Submitted: 26-Sep-2014 |
Accepted: 30-Apr-2023 |
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Key Words: Mariner/Tc1; DNA transposon; Transposable Element; Mariner-26_OT |
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Source: Oxytricha trifallax |
Organism: Oxytricha trifallax |
Taxonomy: Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha |
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Authors: Bao,W. |
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Title: DNA transposons from the Oxytricha trifallax micronuclear genome. |
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Journal: Repbase Reports 23(4), 2224-2224 (2023) |
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Abstract: >99% identical to the consensus. >Mariner-26_OT_1p 611-3265 MRQKETKYTQFEVLLGIKTIKIALFLNQDSRLIVYNLNFQIQISQQSGKS MLNPKNLEILEASMNFKSLKRDLASENINSIKSLEFQKRPPQSVIQQRVQ KGDQQTEENLSQPERKRGRKPQYLNAKFPELIDKAKLILPHHSYDISKIL EMEEFKPLIGSQDLSRYLSKFILNKTTKNQTKSVKDKSIGKISLTKHLIN NQTDFIEVGMPHFPGEDLKPVQIDNLNSQVNYGAKIQSEITSIYIREYII LKPQGRQDFIHKIFNRNSQSLMEFLQNLKTACSENLYENMFRLIYELNMS SSVNLSIKTRLFVSSLLYYNHEIIEIDQDLLKSSMLLLAQRPNTEQALGL SNYIFINEPQCLEKLQEEVFNLDKSNIGIIPLMIGTFQLFKIDSQAVRLL PNTLLCLNKAFIQILKEDQGLRLIRHVPINVVGDFIQICALSSSPSFQKL DKFINTMSEIFIQKWDYIDQEDFTFFLQSVSLELKQRNPLWVNKIDELSE LSNNLAFIQQEKGIRCRRDIIIDCLKADFTKLNLLMHTPNKANDFNEQEL KQIISKFKKLNSDSIQVQDFCLKMQLQAFNESKQLKLFQQLMGFSFLSLQ KLCLNFLMWQNQKFTFINFGVGNGKTLLCSTNAILLAQQHREPVFVIGKN EHLVLRDEKNFEKLIIGLSLNVNVNQYSSLPGVYYLTQKVLENVSANQDF KDIWKNSFVIIDEYDWILLEGCVKQIXDLFDLISTAKGIVGFTGSVISQK ELSCLKVAFDTEETVFPKLSCLMGDKRVKLQQELVSSNQVDYCKRIYEIC LKYCKLTPVLIVAQQSYTIIENYFXKFAYIPFHSMKNVKGPKLEVQFEQQ FSQKNIDGQFGVFLMNEQQGRGTDFKTSHEIEFN >Mariner-26_OT_2p 3428-4144 MENQAHLKLGALQTYLGILKGSQSKSMQDIKRSRMECKAAIDVSINANEV SVHSFQNHDSSIQNIMNSSSSQSENAYLNDQSGLQLSQSNLAPSQEQPKI LKDASEASISEQSLPLTENEVNKSADFMEEVQDKIEKELPGKKNKRQIKQ DSKARVKTEKIDPEAQQVVENSIDLSGKNLAKKSLNKNKLAEQNASQKID SIVGLNRYGRNIMRRAVTSDNQAITTKKRQKQSVIQSL >Mariner-26_OT_3p (DDE-Tpase) 5276-6910 MERLKQSDIRNFYKHNTDNSSQDSFESDASSEMKDLNQSSLVIKLNYIST QLIKAQISQEGPIQIVELDLDENNRIESQLLEQSRQKNYPSQIIDPFAQL EQIKQNTTIEQYFSRELITDYLEKACILHFRLQLGQNMDNESKVYNETHS KQVFQQFKKQCETAALIDDKEELHLQASQIQNIKAEQNVWKKKQKPISTQ GMESRLYSLYENFKVSKQALTRRFKVSYYRVNQIIQKFEKSRSTQNYENQ QIKAYKLSGVALLISKIVQQHQGLVSLQQISSLLKTSFDVNQSISQIRII MRKHLHYSFKKIYYLDKRSSNYRSKSLRRLAAANYIQLLFDNKIIINVDE SSIQHNNPSQKGWGPIGXQSFSTLKRRVSKLNIIAAAFSDGQMHFTVNSG RNNSLSFYNFILKLCCLLEKQDQTWREKFIVQXDNATYHKSSFVREKFKL LKIPIVFLGPYQFNLAPVEKIFAHIKSFYFDSKFFNTGNKQVNSQFLFLT NLFRKQMILNYANHIRSLNFNWLPKAYLKSLNFAMLYLTEADSC >Mariner-26_OT_4p 8677-7889 MEFVEQIMKGFALNCFIERINNLQPFNFRVMAKRFTQEADSNNCRCCRLG SSKIIQEQRVIEQKYKYFNILIVINLYIQLKTDPDSLNIQKIVRNIXRTD SYSFLQFYLFLYCFIIAMNKCFIKNQKNKINLLSNIYKIQFQIMSYQSKK XNSIKIELVLLKTKEIIIKMLKNQKYLKRRFQLPKLLQKVSLIKENQIQI IIQSQDKQEHPHVSVLHVSVIKMSSFSIYKKKLKKNKIYYNYLVYSIRQE RLFNSQRVIIGK >Mariner-26_OT_5p (methylase) 9061-10254 MILKDSINSNQELHDQLYKLANGQCKSEQNEPFNESINIQQQESNSQNQK SEKNKNSQKICQNEKSCKNRMCMNEKKQMKQKYLEQCHYYELKIATLIDQ IRSYEDLITILNDQFGERFRKIVEQVINEFSEDEIKKIQNQDQELDQEED LDLTDSQQSQNQNKRALIKTEDIVENLVLKEKEYQLKFFKWGMRQIKNGS VQYQGSIQNPEVWNQIKKDYKVDKCGNRFDVLLSDGPWDQTACNLNYPTL KDREFLDKIPLEDLQKDGYYFMWITNKKLEAALKHLDDHNYERVEIITWI KIDKKQIIREGIGYFLRHCYEFCIMARNKGPFSCLRQKSKTHSAPNVIFA ELREQSRKPDQIYEIIEQLVPGGRYLELFPRPHNQRVKRTGLGRESI.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References:
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