Repbase Reports |
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| 2023, Volume 23, Issue 5 |
| May 31, 2023 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 3148 |
Harbinger-N3_Ipa |
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Harbinger-N3_Ipa, a novel transposon from the Ilex paraguariensis genome. |
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Submitted: 12-May-2023 |
Accepted: 31-May-2023 |
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Key Words: Harbinger; DNA transposon; Transposable Element; Nonautonomous; Harbinger-N3_Ipa |
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Source: Ilex paraguariensis |
Organism: Ilex paraguariensis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Aquifoliales; Aquifoliaceae; Ilex |
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Authors: Aguilera,P.M. and Grabiele,M. |
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Title: Harbinger transposons from the yerba mate genome. |
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Journal: Repbase Reports 23(5), 3148-3148 (2023) |
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Abstract: De novo search via Repeat Finder from GCA_905181385.1; CDS predicted via Fgenesh and protein annotated via InterProScan. Consensus of 25 seqs; mean 88.59% identity to consensus. Additional features: 24 nt TIRs 95.80% identity; 3 nt TSDs mainly TWA.
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Derived: [1] (Consensus) |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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