Repbase Reports |
|---|
| 2023, Volume 23, Issue 6 |
| June 30, 2023 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4220 |
SINE2-1a_Gmax |
|||
|---|---|---|---|
SINE2-1a_Gmax, a novel SINE retroposon from the Glycine max genome. |
|||
|
Submitted: 05-Jun-2023 |
Accepted: 30-Jun-2023 |
||
|
Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-1a_Gmax |
|||
|
Source: Glycine max |
Organism: Glycine max |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja |
|
| [] |
Authors: Grabiele,M. and Aguilera,P.M. |
||
|
Title: SINE retroposons from plant genomes. |
|||
|
Journal: Repbase Reports 23(6), 4220-4220 (2023) |
|||
Abstract: Analyzed genome: Glycine max Wm82.a4.v1 (Phytozome). Consensus of 41 seqs; mean 80.37% identity to consensus. Additional features: tRNA-related region (1-81); A box (13-24); B box (57-67); tRNA-unrelated region (82-182); poly A tail (183-191). SINE2-1_Gmax variants a and b share 74.50% similarity.
|
|||
|
Derived: |
|||
|
Download Sequence - Format: IG, EMBL, FASTA |
|||
|
References: |
|||