Repbase Reports

2023, Volume 23, Issue 6
June 30, 2023
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 4340

SINE2-3_BDi

SINE2-3_BDi, a novel SINE retroposon from the Brachypodium distachyon genome.

Submitted:
05-Jun-2023
Accepted:
30-Jun-2023
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-3_BDi
Source:
Brachypodium distachyon
Organism:
Brachypodium distachyon
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
SINE retroposons from plant genomes.
Journal:
Repbase Reports 23(6), 4340-4340 (2023)
Abstract:
Analyzed genome: Brachypodium distachyon v3.1 (Phytozome). Consensus of 50 seqs; mean 93.39% identity to consensus. Additional features: tRNA-related region (1-81); A Box (13-24); B Box (57-67); tRNA-unrelated region (82-157); poly A tail (158-166). 98.40% similar to PoaS-I.
Derived:
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute