Repbase Reports |
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| 2023, Volume 23, Issue 6 |
| June 30, 2023 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4172 |
SINE2-3_Lsa |
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SINE2-3_Lsa, a novel SINE retroposon from the Lactuca sativa genome. |
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Submitted: 05-Jun-2023 |
Accepted: 30-Jun-2023 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-3_Lsa |
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Source: Lactuca sativa |
Organism: Lactuca sativa |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Cichorioideae; Cichorieae; Lactucinae; Lactuca |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SINE retroposons from plant genomes. |
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Journal: Repbase Reports 23(6), 4172-4172 (2023) |
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Abstract: Analyzed genome: Lactuca sativa v8 (Phytozome). Consensus of 50 seqs; mean 98.23% identity to consensus. Additional features: tRNA-related region (1-90); A box (15-25); B box (66-76); tRNA-unrelated region (91-217); poly A tail (218-227). 98.80% similar to AsteS-II.
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Derived: |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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