Repbase Reports |
---|
2023, Volume 23, Issue 6 |
June 30, 2023 |
Copyright © 2001-2024 - Genetic Information Research Institute, California |
ISSN# 1534-830X |
Page 4285 |
SINE2-4_Sit |
|||
---|---|---|---|
SINE2-4_Sit, a novel SINE retroposon from the Setaria italica genome. |
|||
Submitted: 05-Jun-2023 |
Accepted: 30-Jun-2023 |
||
Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-4_Sit |
|||
Source: Setaria italica |
Organism: Setaria italica |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria |
|
[] |
Authors: Grabiele,M. and Aguilera,P.M. |
||
Title: SINE retroposons from plant genomes. |
|||
Journal: Repbase Reports 23(6), 4285-4285 (2023) |
|||
Abstract: Analyzed genome: Setaria italica v2.2 (Phytozome). Consensus of 50 seqs; mean 81.76% identity to consensus. Additional features: tRNA-related region (1-81); A box (14-24); B box (57-67); tRNA-unrelated region (82-327); poly A tail (328-333). Mostly 5p truncated copies.
|
|||
Derived: |
|||
Download Sequence - Format: IG, EMBL, FASTA |
|||
References: |