Repbase Reports

2023, Volume 23, Issue 6
June 30, 2023
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 4275

SINE2-4a_Oeu

SINE2-4a_Oeu, a novel SINE retroposon from the Olea europaea genome.

Submitted:
05-Jun-2023
Accepted:
30-Jun-2023
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-4a_Oeu
Source:
Olea europaea
Organism:
Olea europaea
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
SINE retroposons from plant genomes.
Journal:
Repbase Reports 23(6), 4275-4275 (2023)
Abstract:
Analyzed genome: Olea europaea v1.0 (Phytozome). Consensus of 50 seqs; mean 98.75% identity to consensus. Additional features: tRNA-related region (1-91); A box (14-25); B box (67-77); tRNA-unrelated region (92-299); poly A tail (300-319). SINE2-4_Oeu variants a and b share 82.20% similarity.
Derived:
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute