Repbase Reports

2023, Volume 23, Issue 6
June 30, 2023
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 4276

SINE2-4a_Ppe

SINE2-4a_Ppe, a novel SINE retroposon from the Prunus persica genome.

Submitted:
05-Jun-2023
Accepted:
30-Jun-2023
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-4a_Ppe
Source:
Prunus persica
Organism:
Prunus persica
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
SINE retroposons from plant genomes.
Journal:
Repbase Reports 23(6), 4276-4276 (2023)
Abstract:
Analyzed genome: Prunus persica v2.1 (Phytozome). Consensus of 10 seqs; mean 92.30% identity to consensus. Additional features: tRNA-related region (1-81); A box (13-24); B box (57-67); tRNA-unrelated region (82-174); poly A tail (175-188). SINE2-4_Ppe variants a and b share 67.70% similarity.
Derived:
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute