Repbase Reports

2023, Volume 23, Issue 6
June 30, 2023
Copyright © 2001-2024 - Genetic Information Research Institute, California
ISSN# 1534-830X
Page 4233

SINE2-7a_Cci

SINE2-7a_Cci, a novel SINE retroposon from the Corymbia citriodora genome.

Submitted:
05-Jun-2023
Accepted:
30-Jun-2023
Key Words:
SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-7a_Cci
Source:
Corymbia citriodora
Organism:
Corymbia citriodora
Taxonomy:
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Corymbia
[] Authors:
Grabiele,M. and Aguilera,P.M.
Title:
SINE retroposons from plant genomes.
Journal:
Repbase Reports 23(6), 4233-4233 (2023)
Abstract:
Analyzed genome: Corymbia citriodora v2.1 (Phytozome). Consensus of 11 seqs; mean 85.80% identity to consensus. Additional features: tRNA-related region (1-82); A box (14-25); B box (58-68); tRNA-unrelated region (83-249); poly A tail (250-261). First 137 nt similar to SINE2-9c_Cci; similar tRNA-unrelated region to SINE2-1_Cci. SINE2-7_Cci variants a to c share 75.70% similarity.
Derived:
Download Sequence - Format:
IG, EMBL, FASTA
References:

© 2001-2024 - Genetic Information Research Institute