Repbase Reports |
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| 2023, Volume 23, Issue 6 |
| June 30, 2023 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4312 |
SINE2-9a2_Cicl |
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SINE2-9a2_Cicl, a novel SINE retroposon from the Citrus clementina genome. |
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Submitted: 05-Jun-2023 |
Accepted: 30-Jun-2023 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-9a2_Cicl |
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Source: Citrus clementina |
Organism: Citrus clementina |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SINE retroposons from plant genomes. |
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Journal: Repbase Reports 23(6), 4312-4312 (2023) |
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Abstract: Analyzed genome: Citrus clementina v1.0 (Phytozome). Consensus of 26 seqs; mean 87.41% identity to consensus. Additional features: tRNA-related region (1-91); A box (14-24); B box (67-77); tRNA-unrelated region (92-334); poly A tail (335-346). SINE2-9_Cicl variants a1, a2 and b share 74.30% similarity.
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Derived: |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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