Repbase Reports |
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| 2023, Volume 23, Issue 6 |
| June 30, 2023 |
| Copyright © 2001-2024 - Genetic Information Research Institute, California |
| ISSN# 1534-830X |
| Page 4313 |
SINE2-9b1_Cisi |
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SINE2-9b1_Cisi, a novel SINE retroposon from the Citrus sinensis genome. |
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Submitted: 05-Jun-2023 |
Accepted: 30-Jun-2023 |
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Key Words: SINE2/tRNA; SINE; Non-LTR Retrotransposon; Transposable Element; SINE2-9b1_Cisi |
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Source: Citrus sinensis |
Organism: Citrus sinensis |
Taxonomy: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus |
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Authors: Grabiele,M. and Aguilera,P.M. |
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Title: SINE retroposons from plant genomes. |
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Journal: Repbase Reports 23(6), 4313-4313 (2023) |
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Abstract: Analyzed genome: Citrus sinensis v1.1 (Phytozome). Consensus of 46 seqs; mean 93.17% identity to consensus. Additional features: tRNA-related region (1-85); A box (14-25); B box (61-71); tRNA-unrelated region (86-325); poly A tail (326-338). SINE2-9_Cisi variants a, b1 and b2 share 76.80% similarity.
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Derived: |
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Download Sequence - Format: IG, EMBL, FASTA |
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References: |
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